STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91372.1Channel protein, MIP family; KEGG: hiq:CGSHiGG_06740 1.8e-26 glpQ; glycerophosphodiester phosphodiesterase K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family. (234 aa)    
Predicted Functional Partners:
KXG88479.1
Protein phosphatase 2C; KEGG: ols:Olsu_1756 4.7e-138 protein serine/threonine phosphatase K01090; Psort location: Cytoplasmic, score: 7.50.
    
   0.732
KXG90772.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.666
KXG91323.1
DnaJ domain protein; KEGG: apb:SAR116_1614 2.3e-28 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.586
dnaJ
Putative chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...]
    
 
 0.586
KXG89420.1
DnaJ region; KEGG: apb:SAR116_1614 8.9e-34 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.586
KXG91373.1
Hypothetical protein.
       0.561
KXG90627.1
KEGG: sor:SOR_1533 3.3e-240 PTS system, IIABC component; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.534
KXG89446.1
Phosphotransferase system, EIIC; KEGG: pta:HPL003_08735 5.9e-92 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.534
KXG91364.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 6.7e-84 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.492
thrS
threonine--tRNA ligase; KEGG: ols:Olsu_0800 9.5e-259 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
    
 
 0.434
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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