STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91244.1Putative integral membrane protein MviN; KEGG: pfe:PSF113_5043 2.2e-22 murJ; protein MurJ K03980; Psort location: CytoplasmicMembrane, score: 10.00. (542 aa)    
Predicted Functional Partners:
KXG88477.1
FHA domain protein; KEGG: rca:Rcas_2253 3.7e-05 adenylate cyclase; K01768 adenylate cyclase; Psort location: Cytoplasmic, score: 7.50.
  
 
 
 0.933
KXG88480.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: ols:Olsu_1757 0. peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
  
 0.841
KXG88478.1
FHA domain protein; KEGG: npu:Npun_F1117 8.6e-09 forkhead-associated protein; Psort location: CytoplasmicMembrane, score: 8.16.
  
 
 
 0.780
KXG91368.1
Putative oxoglutarate dehydrogenase inhibitor; KEGG: mxa:MXAN_3956 2.6e-09 adenylate cyclase; K01768 adenylate cyclase; Psort location: Extracellular, score: 8.91.
  
 
 
 0.684
KXG90284.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
  
   
 0.650
KXG90773.1
Tetratricopeptide repeat protein; KEGG: sur:STAUR_2179 4.4e-09 Ser/Thr kinase family protein.
 
    0.645
KXG90515.1
FHA domain protein; Psort location: Cytoplasmic, score: 7.50.
    
 
 0.634
KXG91245.1
YbaK/EbsC protein; KEGG: bya:BANAU_2580 4.2e-27 yjdI; prolyl-tRNA synthetase K03976; Psort location: Cytoplasmic, score: 7.50; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.597
KXG91318.1
KEGG: ols:Olsu_0981 7.1e-41 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.587
tsaD
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
     0.521
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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