STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91249.1Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 10.00. (418 aa)    
Predicted Functional Partners:
KXG91250.1
LICD family protein; KEGG: ols:Olsu_0585 5.7e-94 LicD family protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.941
KXG91248.1
KEGG: sor:SOR_1377 9.3e-142 licA; choline kinase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.890
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
    
  0.874
KXG88583.1
KEGG: ols:Olsu_1705 0. 4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
    
  0.777
KXG91256.1
Hypothetical protein; KEGG: sds:SDEG_0761 1.5e-15 glycosyltransferase K09153; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.767
KXG88856.1
LICD family protein; KEGG: apv:Apar_1004 7.7e-83 LicD family protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.752
KXG91294.1
SCP-like protein; KEGG: cbe:Cbei_3870 6.9e-14 glycosyl hydrolase family 32 protein; K03332 fructan beta-fructosidase; Psort location: Extracellular, score: 9.72.
 
     0.665
KXG91253.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.665
KXG91258.1
dTDP-glucose 4,6-dehydratase; KEGG: eyy:EGYY_09220 3.2e-132 hypothetical protein; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 7.50; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.665
KXG91260.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.662
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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