STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91251.1Hypothetical protein; KEGG: sds:SDEG_0759 1.4e-44 cell wall biogenesis glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.87. (243 aa)    
Predicted Functional Partners:
KXG88583.1
KEGG: ols:Olsu_1705 0. 4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.564
KXG91249.1
Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.542
KXG91250.1
LICD family protein; KEGG: ols:Olsu_0585 5.7e-94 LicD family protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 7.50.
       0.506
KXG91252.1
Glycosyltransferase, group 2 family protein; KEGG: ecm:EcSMS35_2262 6.0e-28 glycosyl transferase, group 2; Psort location: CytoplasmicMembrane, score: 8.78.
       0.506
KXG91248.1
KEGG: sor:SOR_1377 9.3e-142 licA; choline kinase; Psort location: Cytoplasmic, score: 7.50.
     
 0.413
KXG88858.1
KEGG: pdn:HMPREF9137_0030 1.9e-166 class I/II aminotransferase; Psort location: Cytoplasmic, score: 7.50.
  
 0.403
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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