STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91258.1dTDP-glucose 4,6-dehydratase; KEGG: eyy:EGYY_09220 3.2e-132 hypothetical protein; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 7.50; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (367 aa)    
Predicted Functional Partners:
KXG91253.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 
 0.999
KXG91260.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 0.999
KXG91259.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.995
KXG90498.1
KEGG: ols:Olsu_0828 9.0e-160 UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.945
KXG88346.1
UDP-glucose 4-epimerase; KEGG: ols:Olsu_1561 1.0e-142 UDP-galactose 4-epimerase K01784; Psort location: Cytoplasmic, score: 7.50; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
0.886
KXG89383.1
KEGG: ols:Olsu_0142 5.9e-108 nucleotidyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.843
KXG88858.1
KEGG: pdn:HMPREF9137_0030 1.9e-166 class I/II aminotransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.797
KXG91249.1
Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.665
KXG88842.1
Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.665
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
    
 0.584
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.