STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91096.1KEGG: snc:HMPREF0837_11106 7.9e-168 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00. (572 aa)    
Predicted Functional Partners:
KXG91098.1
Cobalt transport protein; KEGG: sap:Sulac_1647 2.6e-07 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.923
KXG91097.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.914
KXG90508.1
KEGG: gfo:GFO_0536 3.5e-62 ABC-type transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
     
0.900
KXG90537.1
Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: sap:Sulac_2661 2.5e-93 oligopeptide/dipeptide ABC transporter ATPase K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
 
0.897
KXG91099.1
KEGG: snc:HMPREF0837_11109 5.6e-119 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
0.847
KXG91095.1
KEGG: snc:HMPREF0837_11105 5.9e-179 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.843
KXG91094.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.785
KXG88593.1
KEGG: crd:CRES_1496 2.4e-18 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.51.
  
  0.753
KXG88596.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bya:BANAU_3847 2.0e-61 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78.
  
0.646
KXG91120.1
ABC transporter, ATP-binding protein; KEGG: gth:Geoth_2007 6.6e-45 Heme-transporting ATPase K09687; Psort location: CytoplasmicMembrane, score: 8.78.
   
0.629
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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