STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91097.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (197 aa)    
Predicted Functional Partners:
KXG91098.1
Cobalt transport protein; KEGG: sap:Sulac_1647 2.6e-07 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.957
KXG91099.1
KEGG: snc:HMPREF0837_11109 5.6e-119 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.96.
 
    0.949
KXG91095.1
KEGG: snc:HMPREF0837_11105 5.9e-179 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.915
KXG91096.1
KEGG: snc:HMPREF0837_11106 7.9e-168 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.914
KXG88583.1
KEGG: ols:Olsu_1705 0. 4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.820
KXG91094.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.811
KXG88593.1
KEGG: crd:CRES_1496 2.4e-18 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.51.
 
    0.777
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.658
KXG91087.1
Putative GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
  0.464
KXG88904.1
KEGG: ols:Olsu_1499 0. anaerobic ribonucleoside-triphosphate reductase K00527; Psort location: Cytoplasmic, score: 7.50.
    
  0.443
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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