STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91134.1Hypothetical protein; KEGG: cdf:CD0482 1.2e-06 spaK; lantibiotic resistance two-component sensor kinase. (46 aa)    
Predicted Functional Partners:
KXG91404.1
CRISPR-associated endoribonuclease Cas2; KEGG: brm:Bmur_2247 5.3e-20 DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.786
KXG91135.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
KXG91136.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.682
KXG90691.1
Putative transcriptional regulatory protein WalR; KEGG: fal:FRAAL1628 2.5e-38 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
  
 0.679
KXG89566.1
Transcriptional regulatory protein; KEGG: bbp:BBPR_1604 4.9e-17 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
  
 0.679
KXG89133.1
KEGG: rha:RHA1_ro05622 4.0e-38 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
  
 0.679
KXG88487.1
Response regulator receiver domain protein; KEGG: bbp:BBPR_1604 2.5e-29 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
  
 0.679
KXG88492.1
Putative sensory transduction protein RegX3; KEGG: npu:Npun_F4214 1.3e-50 two component transcriptional regulator K07657; Psort location: Cytoplasmic, score: 9.97.
  
 0.679
KXG88595.1
Putative DNA-binding response regulator MtrA; KEGG: npu:Npun_F5788 3.8e-33 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
  
 0.679
KXG90801.1
Stage II sporulation protein E; KEGG: awo:Awo_c32270 5.0e-23 phosphoprotein phosphatase K07315; Psort location: Cytoplasmic, score: 7.50.
    
 0.613
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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