STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91135.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (89 aa)    
Predicted Functional Partners:
KXG91136.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     0.950
KXG88506.1
Sporulation initiation inhibitor protein Soj; KEGG: nmh:NMBH4476_0189 5.0e-63 chromosome partitioning protein, ParA family K03496; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
 0.795
KXG91134.1
Hypothetical protein; KEGG: cdf:CD0482 1.2e-06 spaK; lantibiotic resistance two-component sensor kinase.
       0.773
KXG89828.1
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.769
KXG89832.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.769
KXG89816.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.700
KXG90564.1
KEGG: efc:EFAU004_00298 2.5e-09 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.573
KXG91137.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.551
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.536
KXG89330.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 3.2e-94 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.445
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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