STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91022.1Hypothetical protein; KEGG: pbe:PB000911.00.0 0.0063 vacuolar ATP synthetase; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit; Psort location: CytoplasmicMembrane, score: 10.00. (124 aa)    
Predicted Functional Partners:
KXG91433.1
Hypothetical protein; KEGG: bqy:MUS_1487 6.6e-13 ykuC; MFS transporter, DHA3 family, macrolide efflux protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.976
KXG91020.1
ABC transporter, ATP-binding protein; KEGG: bao:BAMF_0495 1.1e-53 vmlR; antibiotic efflux ATP-binding transport protein; Psort location: Cytoplasmic, score: 9.95.
 
     0.750
KXG89182.1
Hypothetical protein; KEGG: sah:SaurJH1_2478 8.0e-14 ribulose-phosphate 3-epimerase K01783.
  
     0.581
KXG89306.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: dwi:Dwil_GK22102 1.4e-39 GK22102 gene product from transcript GK22102-RA; K00907 myosin-light-chain kinase; Psort location: Cellwall, score: 9.39.
  
     0.495
KXG89312.1
GA module; KEGG: dme:Dmel_CG18255 2.2e-23 Strn-Mlck; Stretchin-Mlck K00907; Psort location: Cellwall, score: 9.39.
  
     0.495
KXG90486.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.