STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90803.1KEGG: gvg:HMPREF0421_21032 6.7e-116 cysE; serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.67. (288 aa)    
Predicted Functional Partners:
KXG90804.1
Cysteine synthase A; KEGG: gvh:HMPREF9231_0553 2.2e-149 cysK; cysteine synthase A K01738; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.998
cysS
cysteine--tRNA ligase; KEGG: apv:Apar_1181 1.6e-192 cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.988
KXG90731.1
KEGG: ols:Olsu_1081 7.1e-183 L-serine dehydratase, iron-sulfur-dependent subunit alpha K01752; Psort location: Cytoplasmic, score: 7.50.
     
 0.904
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.890
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.878
KXG90802.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.664
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.617
KXG89449.1
Putative maltose regulon modulator MalY; KEGG: lra:LRHK_475 5.6e-119 malY; protein MalY; K14155 cystathione beta-lyase.
     
 0.574
KXG88565.1
HAD hydrolase, family IB; KEGG: mej:Q7A_31 1.7e-16 phosphoserine phosphatase; Psort location: CytoplasmicMembrane, score: 8.16.
    
 0.573
KXG91262.1
Nucleotide-binding family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.547
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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