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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90872.1NifU-like protein; KEGG: apb:SAR116_1595 1.3e-09 nitrogen-fixing NifU domain-containing protein; Psort location: Cytoplasmic, score: 7.50. (189 aa)    
Predicted Functional Partners:
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.894
KXG90828.1
Aminotransferase, class V; KEGG: ols:Olsu_0922 7.7e-99 cysteine desulfurase K04487; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.830
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.815
KXG90786.1
KEGG: apv:Apar_0913 3.6e-108 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.813
KXG89587.1
SUF system FeS assembly protein, NifU family; KEGG: hbo:Hbor_34450 6.3e-06 cysteine desulfurase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.757
KXG91012.1
4Fe-4S binding domain protein; KEGG: mru:mru_0830 3.5e-09 ferredoxin; K00205 formylmethanofuran dehydrogenase subunit F; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.742
KXG90873.1
Peptidase, U32 family; KEGG: ols:Olsu_0606 8.5e-219 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 7.50.
       0.483
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
 0.465
KXG90857.1
Metallo-beta-lactamase domain protein; KEGG: dth:DICTH_1660 4.4e-48 nitric oxide reductase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.439
KXG88879.1
Twin arginine-targeting protein translocase, TatA/E family; KEGG: ctu:CTU_13460 3.4e-06 tolA; cell envelope integrity inner membrane protein TolA K03646; Psort location: Cytoplasmic, score: 7.50.
  
    0.405
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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