STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90750.1RNA methyltransferase, RsmD family; KEGG: cgo:Corgl_1059 7.1e-25 methyltransferase; K08316 16S rRNA (guanine966-N2)-methyltransferase; Psort location: Cytoplasmic, score: 7.50. (198 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
  
 0.924
KXG90748.1
DAK2 domain fusion protein YloV; KEGG: efu:HMPREF0351_10092 8.9e-89 dhaK; glycerone kinase K07030; Psort location: Cytoplasmic, score: 7.50.
 
     0.695
KXG90749.1
KEGG: ols:Olsu_1064 9.8e-170 ATP-dependent DNA helicase RecG K03655; Psort location: Cytoplasmic, score: 9.97.
       0.619
KXG90746.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.592
priA
Primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
 
     0.486
KXG90747.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.471
KXG90752.1
Hypothetical protein; KEGG: edi:EDI_341030 0.00057 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
       0.470
KXG90759.1
Signal recognition particle-docking protein FtsY; KEGG: apb:SAR116_1814 4.6e-53 cell division protein ftsY K03110; Psort location: CytoplasmicMembrane, score: 8.78.
 
   
 0.465
KXG90753.1
Putative ACR; Psort location: Cytoplasmic, score: 7.50.
       0.439
KXG90740.1
NusB family protein; KEGG: ols:Olsu_1070 5.4e-43 NusB/RsmB/TIM44; K03500 16S rRNA (cytosine967-C5)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
   
 0.433
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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