STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90778.1Putative rod shape-determining protein RodA; KEGG: kfl:Kfla_2886 8.9e-41 cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family. (430 aa)    
Predicted Functional Partners:
KXG90777.1
KEGG: ols:Olsu_0861 1.9e-237 penicillin-binding protein 2 K05515; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
KXG90775.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
  
 0.965
KXG90774.1
KEGG: hpx:HMPREF0462_0035 7.0e-89 rod shape-determining protein K03569; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.958
KXG90277.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: ols:Olsu_1103 7.2e-174 peptidoglycan glycosyltransferase K03587; Psort location: CytoplasmicMembrane, score: 9.51.
 
 0.937
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.859
KXG90776.1
KEGG: sew:SeSA_A3564 0.00036 lytS; rod shape-determining protein MreD K03571; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.857
KXG90284.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
  
 
 0.814
KXG88480.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: ols:Olsu_1757 0. peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 
0.796
KXG89425.1
ImpB/MucB/SamB family protein; KEGG: cgo:Corgl_0698 6.5e-102 DNA-directed DNA polymerase K03502; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.728
KXG90278.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.
 
 
 0.719
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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