STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90570.1ABC transporter, ATP-binding protein; KEGG: bde:BDP_0608 1.6e-73 livG; branched-chain amino acid transport ATP-binding protein livG K01995; Psort location: CytoplasmicMembrane, score: 8.78. (315 aa)    
Predicted Functional Partners:
KXG90571.1
KEGG: har:HEAR2680 2.7e-39 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
KXG90572.1
Putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH; KEGG: cnc:CNE_2c19880 4.5e-46 cpg2; carboxypeptidase G2 K01997; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
KXG90573.1
Tat pathway signal sequence domain protein; KEGG: apb:SAR116_0346 4.0e-31 high affinity branched-chain amino acid amino acid ABC transporter substrate-binding protein K01999.
 
 
 0.997
KXG90569.1
High-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF; KEGG: dca:Desca_1311 1.4e-76 Fe(3+)-transporting ATPase K01996; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
0.995
KXG88386.1
ABC transporter, ATP-binding protein; KEGG: dku:Desku_2823 6.5e-54 sulfate-transporting ATPase; Psort location: CytoplasmicMembrane, score: 8.78.
   
 
0.774
KXG88596.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bya:BANAU_3847 2.0e-61 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78.
   
 
0.476
KXG89328.1
KEGG: apb:SAR116_1967 9.9e-35 ABC transporter permease K15599; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.475
KXG89327.1
Tat pathway signal sequence domain protein; KEGG: mah:MEALZ_2389 1.6e-08 histidine kinase; K07679 two-component system, NarL family, sensor histidine kinase EvgS; Psort location: Cytoplasmic, score: 7.50.
    
  0.465
KXG90582.1
Flavin reductase; KEGG: aur:HMPREF9243_0736 5.4e-66 flavin reductase.
    
  0.444
KXG90643.1
Tat pathway signal sequence domain protein; KEGG: snc:HMPREF0837_10106 0.00018 maltose/maltodextrin ABC transporter ATP-binding protein K10108.
  
 
  0.408
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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