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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90604.1Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 1.6e-18 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00. (251 aa)    
Predicted Functional Partners:
KXG90605.1
ABC transporter, ATP-binding protein; KEGG: dku:Desku_2237 5.5e-73 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.993
KXG90606.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.972
KXG90493.1
KEGG: gvg:HMPREF0421_21025 2.4e-102 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.958
KXG90492.1
KEGG: gvg:HMPREF0421_21026 1.7e-85 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.957
KXG88359.1
Cobalt transport protein; KEGG: bya:BANAU_0146 8.6e-13 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.950
KXG90489.1
Cobalt transport protein; KEGG: bde:BDP_1327 2.1e-103 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.60.
 
 0.945
KXG88343.1
KEGG: bbp:BBPR_0676 3.4e-80 Fused ATP-binding protein and permease of ABC transporter K02006; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.943
KXG88363.1
KEGG: bbp:BBPR_0676 1.9e-42 Fused ATP-binding protein and permease of ABC transporter K02006; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.912
KXG88593.1
KEGG: crd:CRES_1496 2.4e-18 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.51.
  
 0.890
KXG91099.1
KEGG: snc:HMPREF0837_11109 5.6e-119 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.810
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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