STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90610.1Toxin-antitoxin system, toxin component, Fic family; KEGG: pdn:HMPREF9137_0457 3.6e-21 purC_2; phosphoribosylaminoimidazole succinocarboxamide synthase; Psort location: Cytoplasmic, score: 7.50. (365 aa)    
Predicted Functional Partners:
KXG90745.1
KEGG: cff:CFF8240_1393 8.9e-192 restriction and modification enzyme CjeI; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 7.50.
  
    0.910
KXG90611.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.792
KXG90612.1
Hypothetical protein; KEGG: vpr:Vpar_0116 1.3e-15 N-6 DNA methylase; K03427 type I restriction enzyme M protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
    0.755
KXG90618.1
Hypothetical protein; KEGG: fsc:FSU_1813 4.8e-41 hsdR; type I restriction-modification system, R subunit K01153.
  
    0.722
KXG90609.1
Hypothetical protein; KEGG: vpr:Vpar_0116 3.5e-23 N-6 DNA methylase; K03427 type I restriction enzyme M protein.
  
    0.516
KXG89473.1
Hypothetical protein; KEGG: mel:Metbo_2153 9.1e-07 type ii site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 7.50.
  
    0.462
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.