close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90486.1Hypothetical protein. (481 aa)    
Predicted Functional Partners:
KXG89312.1
GA module; KEGG: dme:Dmel_CG18255 2.2e-23 Strn-Mlck; Stretchin-Mlck K00907; Psort location: Cellwall, score: 9.39.
  
  
  0.754
KXG89257.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.754
KXG89182.1
Hypothetical protein; KEGG: sah:SaurJH1_2478 8.0e-14 ribulose-phosphate 3-epimerase K01783.
  
     0.737
KXG91066.1
KEGG: ere:EUBREC_3553 1.1e-42 serine-type D-Ala-D-Ala carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
  
     0.734
KXG89306.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: dwi:Dwil_GK22102 1.4e-39 GK22102 gene product from transcript GK22102-RA; K00907 myosin-light-chain kinase; Psort location: Cellwall, score: 9.39.
  
   
 0.732
KXG90699.1
Sel1 repeat protein; KEGG: tet:TTHERM_00170490 2.8e-06 sel1 repeat protein K01467.
  
     0.731
KXG89816.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.673
KXG89804.1
Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 5.5e-20 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 7.50; Belongs to the 'phage' integrase family.
  
    0.583
KXG89836.1
Leucine Rich repeat-containing domain protein; KEGG: tva:TVAG_387410 3.9e-10 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: Cellwall, score: 9.21.
  
   
 0.535
KXG88842.1
Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.529
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.