STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90502.1Glutamate--ammonia ligase, catalytic domain protein; KEGG: ols:Olsu_1333 7.5e-298 L-glutamine synthetase K01915; Psort location: Cytoplasmic, score: 9.97. (696 aa)    
Predicted Functional Partners:
KXG89567.1
Glutamine synthetase, beta-grasp domain protein; KEGG: ols:Olsu_1347 8.4e-180 L-glutamine synthetase K01915; Psort location: Cytoplasmic, score: 9.67.
    
 0.915
KXG90314.1
KEGG: apv:Apar_0610 3.4e-183 glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.907
KXG88353.1
Glutamate synthase; KEGG: ols:Olsu_1572 3.3e-208 sulfide dehydrogenase (flavoprotein) subunit SudA K00266; Psort location: Cytoplasmic, score: 9.97.
    
 0.907
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.900
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.895
KXG91012.1
4Fe-4S binding domain protein; KEGG: mru:mru_0830 3.5e-09 ferredoxin; K00205 formylmethanofuran dehydrogenase subunit F; Psort location: Cytoplasmic, score: 7.50.
     
 0.881
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.443
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.442
KXG90503.1
KEGG: rlt:Rleg2_4805 1.7e-09 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.421
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.406
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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