STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90508.1KEGG: gfo:GFO_0536 3.5e-62 ABC-type transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96. (243 aa)    
Predicted Functional Partners:
KXG90509.1
Efflux ABC transporter, permease protein; KEGG: cli:Clim_1944 8.8e-38 ABC transporter; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
KXG89330.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 3.2e-94 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.997
KXG90507.1
Efflux transporter, RND family, MFP subunit; KEGG: pfe:PSF113_1858 2.2e-16 pyoverdine-specific efflux macA-like protein K13888; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.987
KXG91096.1
KEGG: snc:HMPREF0837_11106 7.9e-168 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
     
0.900
KXG89463.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3439 1.6e-130 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
     
0.897
KXG89462.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3438 1.4e-156 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
     
0.891
KXG88483.1
Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 1.8e-31 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.884
KXG89437.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4052 3.8e-120 xenobiotic-transporting ATPase K06148; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.858
KXG90823.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3442 8.5e-84 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
     
0.815
KXG90848.1
ABC transporter, permease protein; KEGG: clo:HMPREF0868_1418 8.6e-52 ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 9.51.
 
 
 0.806
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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