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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90509.1Efflux ABC transporter, permease protein; KEGG: cli:Clim_1944 8.8e-38 ABC transporter; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00. (450 aa)    
Predicted Functional Partners:
KXG90508.1
KEGG: gfo:GFO_0536 3.5e-62 ABC-type transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 0.999
KXG90507.1
Efflux transporter, RND family, MFP subunit; KEGG: pfe:PSF113_1858 2.2e-16 pyoverdine-specific efflux macA-like protein K13888; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.991
KXG88485.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_1569 2.2e-76 sulfate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 0.991
KXG89331.1
ABC transporter, ATP-binding protein; KEGG: taz:TREAZ_1964 5.5e-73 macrolide export ATP-binding/permease MacB K02003; Psort location: CytoplasmicMembrane, score: 9.96.
 0.989
KXG90849.1
KEGG: aur:HMPREF9243_1447 2.3e-81 glnQ_2; glutamine ABC transporter ATP-binding protein GlnQ; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
      0.900
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
    
 0.900
KXG88890.1
KEGG: ols:Olsu_1490 4.4e-96 amino acid ABC transporter ATP-binding protein; K10008 glutamate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
      0.900
KXG88497.1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
      0.897
KXG90493.1
KEGG: gvg:HMPREF0421_21025 2.4e-102 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
    0.861
KXG89344.1
ABC transporter, ATP-binding protein; KEGG: ols:Olsu_1166 1.0e-160 ABC transporter; K02010 iron(III) transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
    0.839
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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