STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90537.1Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: sap:Sulac_2661 2.5e-93 oligopeptide/dipeptide ABC transporter ATPase K02032; Psort location: CytoplasmicMembrane, score: 9.96. (379 aa)    
Predicted Functional Partners:
KXG90539.1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: apb:SAR116_0601 1.1e-51 binding-protein-dependent transport system inner membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.997
KXG90807.1
ABC transporter, permease protein; KEGG: pfe:PSF113_0787 9.5e-53 dppC; protein DppC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.989
KXG90540.1
Putative glutathione ABC transporter, permease protein GsiC; KEGG: amt:Amet_2908 3.0e-65 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.976
KXG89438.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4053 1.6e-105 xenobiotic-transporting ATPase K06148; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 
0.910
KXG90808.1
ABC transporter, permease protein; KEGG: spe:Spro_0139 2.6e-59 dipeptide transporter permease DppB K12369; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.903
KXG91096.1
KEGG: snc:HMPREF0837_11106 7.9e-168 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 
0.897
KXG89463.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3439 1.6e-130 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 
0.891
KXG89462.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3438 1.4e-156 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 
0.882
KXG89437.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4052 3.8e-120 xenobiotic-transporting ATPase K06148; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.881
KXG90541.1
Tat pathway signal sequence domain protein; KEGG: apv:Apar_0955 2.1e-112 4-phytase K02035; Psort location: Cellwall, score: 9.20.
 
 
 0.847
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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