STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90539.1Putative oligopeptide ABC transporter, permease protein AppC; KEGG: apb:SAR116_0601 1.1e-51 binding-protein-dependent transport system inner membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00. (307 aa)    
Predicted Functional Partners:
KXG90538.1
Putative oligopeptide ABC transporter, ATP-binding protein OppD; KEGG: tep:TepRe1_1901 4.1e-90 peptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.998
KXG90540.1
Putative glutathione ABC transporter, permease protein GsiC; KEGG: amt:Amet_2908 3.0e-65 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
KXG90537.1
Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: sap:Sulac_2661 2.5e-93 oligopeptide/dipeptide ABC transporter ATPase K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.997
KXG90806.1
Oligopeptide transport ATP-binding protein OppD; KEGG: gth:Geoth_2280 1.4e-99 oligopeptide/dipeptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.991
KXG90805.1
Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: sap:Sulac_2661 5.9e-108 oligopeptide/dipeptide ABC transporter ATPase K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.990
KXG90808.1
ABC transporter, permease protein; KEGG: spe:Spro_0139 2.6e-59 dipeptide transporter permease DppB K12369; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.990
KXG90809.1
Tat pathway signal sequence domain protein; KEGG: xce:Xcel_0952 5.2e-61 4-phytase K02035; Psort location: Cellwall, score: 9.21.
 0.976
KXG90541.1
Tat pathway signal sequence domain protein; KEGG: apv:Apar_0955 2.1e-112 4-phytase K02035; Psort location: Cellwall, score: 9.20.
 0.949
KXG88497.1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 
  0.883
KXG90849.1
KEGG: aur:HMPREF9243_1447 2.3e-81 glnQ_2; glutamine ABC transporter ATP-binding protein GlnQ; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
    
 0.870
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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