STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90546.1BtpA family protein; Psort location: Cytoplasmic, score: 7.50. (245 aa)    
Predicted Functional Partners:
KXG90544.1
KEGG: mpx:MPD5_1285 3.4e-41 PTS system mannose-specific transporter subunit IIC K02795; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.871
KXG90547.1
KEGG: cdf:CD1074 8.2e-15 PTS system transporter subunit IIA; K02793 PTS system, mannose-specific IIA component; Psort location: Cytoplasmic, score: 7.50.
 
     0.833
KXG90543.1
Putative mannose permease IID component; KEGG: shb:SU5_01264 8.7e-59 PTS system mannose-specific transporter subunit IID K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.829
KXG90545.1
KEGG: cdf:CD1076 2.7e-41 PTS system transporter subunit IIB; K02794 PTS system, mannose-specific IIB component; Psort location: Cytoplasmic, score: 9.67.
 
     0.806
KXG89555.1
Triose-phosphate isomerase family protein; KEGG: ols:Olsu_0106 8.1e-95 triosephosphate isomerase K01803; Psort location: Cytoplasmic, score: 7.50.
  
     0.564
KXG90548.1
KEGG: efe:EFER_3657 9.2e-16 GntR-family transcriptional regulator K03710; Psort location: Cytoplasmic, score: 7.50.
  
    0.519
KXG90549.1
KEGG: gvh:HMPREF9231_1252 4.7e-67 isochorismatase family protein.
       0.483
KXG89554.1
Hypothetical protein; KEGG: dae:Dtox_0608 4.5e-05 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; Psort location: Cytoplasmic, score: 7.50.
 
     0.405
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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