STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90549.1KEGG: gvh:HMPREF9231_1252 4.7e-67 isochorismatase family protein. (203 aa)    
Predicted Functional Partners:
KXG89562.1
Prolyl aminopeptidase; KEGG: ols:Olsu_1337 4.1e-100 proline-specific peptidase K01259; Psort location: Cytoplasmic, score: 7.50; Belongs to the peptidase S33 family.
  
 0.814
KXG91349.1
Chorismate binding enzyme; KEGG: ere:EUBREC_2980 5.0e-150 anthranilate/para-aminobenzoate synthase component I, TrpE; K01657 anthranilate synthase component I; Psort location: Cytoplasmic, score: 9.97.
    
 0.790
KXG90548.1
KEGG: efe:EFER_3657 9.2e-16 GntR-family transcriptional regulator K03710; Psort location: Cytoplasmic, score: 7.50.
  
    0.697
KXG90578.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.686
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.632
KXG89576.1
Hypothetical protein; KEGG: ols:Olsu_0702 4.1e-14 amidohydrolase; K01950 NAD+ synthase (glutamine-hydrolysing).
  
 
 0.632
KXG90857.1
Metallo-beta-lactamase domain protein; KEGG: dth:DICTH_1660 4.4e-48 nitric oxide reductase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.605
gpsA
NAD-dependent glycerol-3-phosphate dehydrogenase [NAD(P)+ ] protein; KEGG: ols:Olsu_0920 4.7e-99 glycerol-3-phosphate dehydrogenase K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.595
KXG88452.1
Putative cytidine/uridine-specific hydrolase; KEGG: acl:ACL_1373 2.4e-86 ribonucleoside hydrolase RihC K12700; Psort location: Cytoplasmic, score: 7.50.
     
 0.592
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.566
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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