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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90297.1AMP-binding enzyme; KEGG: tsu:Tresu_1001 2.5e-109 phenylalanine racemase; Psort location: Cytoplasmic, score: 9.97. (525 aa)    
Predicted Functional Partners:
KXG90299.1
Hypothetical protein; KEGG: ooe:OEOE_0287 7.5e-05 D-alanyl transfer protein; K14188 D-alanine--poly(phosphoribitol) ligase subunit 2; Psort location: Cytoplasmic, score: 7.50.
 
 0.997
KXG90200.1
MBOAT family protein; KEGG: dat:HRM2_03620 1.0e-40 algI1; protein AlgI1; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.959
KXG90298.1
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein; KEGG: ols:Olsu_0510 1.7e-110 Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.938
acpP
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.924
KXG90295.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.915
KXG90864.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.890
ddl
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
     
 0.804
KXG90296.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.784
KXG91082.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.641
KXG90622.1
Branched-chain-amino-acid transaminase; KEGG: ols:Olsu_1384 3.7e-106 branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase.
   
 0.632
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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