STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90314.1KEGG: apv:Apar_0610 3.4e-183 glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (443 aa)    
Predicted Functional Partners:
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.986
KXG88353.1
Glutamate synthase; KEGG: ols:Olsu_1572 3.3e-208 sulfide dehydrogenase (flavoprotein) subunit SudA K00266; Psort location: Cytoplasmic, score: 9.97.
  
 0.975
KXG89567.1
Glutamine synthetase, beta-grasp domain protein; KEGG: ols:Olsu_1347 8.4e-180 L-glutamine synthetase K01915; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.932
KXG90764.1
Prephenate dehydratase; KEGG: ols:Olsu_0846 1.5e-111 Chorismate mutase K14170; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.926
KXG89411.1
Aminotransferase, class I/II; KEGG: ols:Olsu_0095 2.7e-126 class I and II aminotransferase; K11358 aspartate aminotransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.926
KXG89530.1
Carbamate kinase; KEGG: eyy:EGYY_18950 2.6e-98 hypothetical protein; K00926 carbamate kinase; Psort location: Cytoplasmic, score: 7.50.
     
 0.923
KXG90857.1
Metallo-beta-lactamase domain protein; KEGG: dth:DICTH_1660 4.4e-48 nitric oxide reductase; Psort location: Cytoplasmic, score: 9.97.
    
 0.920
KXG91012.1
4Fe-4S binding domain protein; KEGG: mru:mru_0830 3.5e-09 ferredoxin; K00205 formylmethanofuran dehydrogenase subunit F; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.914
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
    
 0.908
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
     
 0.907
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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