STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90330.1Sugar-binding domain protein; KEGG: baa:BAA13334_I01375 1.2e-31 glycerone kinase; K05878 dihydroxyacetone kinase, N-terminal domain; Psort location: Cytoplasmic, score: 7.50. (331 aa)    
Predicted Functional Partners:
KXG89320.1
KEGG: ssa:SSA_0049 1.4e-131 dihydroxyacetone kinase subunit DhaK K05878; Psort location: Cytoplasmic, score: 7.50.
   
  0.925
KXG89317.1
Putative dihydroxyacetone kinase DhaK1b subunit; KEGG: sds:SDEG_0554 2.6e-89 DhaKLM operon coactivator DhaQ K00863; Psort location: Cytoplasmic, score: 7.50.
   
  0.920
KXG90329.1
Transcriptional regulator, DeoR family; KEGG: hip:CGSHiEE_02055 1.6e-25 fucI; L-fucose isomerase K02430.
 
   
 0.807
KXG90328.1
Glycyl-radical enzyme activating protein family protein; KEGG: smu:SMU_490 7.4e-101 pflC; pyruvate formate-lyase activating enzyme; K04069 pyruvate formate lyase activating enzyme; Psort location: Cytoplasmic, score: 9.97.
       0.543
KXG90331.1
KEGG: sdg:SDE12394_00695 1.3e-34 Putative PTS system, enzyme III; K02759 PTS system, cellobiose-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
       0.417
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.