STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90269.1Acetyltransferase, GNAT family; KEGG: bbb:BIF_01130 6.4e-24 Acetyltransferase; Psort location: Cytoplasmic, score: 7.50. (161 aa)    
Predicted Functional Partners:
KXG89805.1
DNA-binding helix-turn-helix protein; KEGG: apb:SAR116_1068 0.0011 transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.781
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.778
tsaD
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.633
nadK
NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
    0.503
KXG90268.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.500
KXG91110.1
Hypothetical protein; KEGG: rho:RHOM_13395 1.6e-21 RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.499
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.477
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
    0.454
KXG90298.1
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein; KEGG: ols:Olsu_0510 1.7e-110 Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
   
  0.426
KXG90266.1
Ribosomal RNA large subunit methyltransferase J; KEGG: apv:Apar_0472 4.4e-64 hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase.
       0.404
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.