STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG90292.1Cell wall-binding repeat protein; KEGG: cbe:Cbei_3870 6.3e-09 glycosyl hydrolase family 32 protein; K03332 fructan beta-fructosidase. (561 aa)    
Predicted Functional Partners:
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
  
    0.527
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.494
KXG90291.1
DivIVA domain protein; KEGG: nmg:Nmag_1377 3.1e-07 ATP synthase H subunit; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 9.67.
       0.454
KXG90284.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
   
 
 0.451
KXG90276.1
Putative cell division protein FtsL; Psort location: CytoplasmicMembrane, score: 9.55.
   
 
 0.406
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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