STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89794.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
   
  0.809
KXG89840.1
Cna protein B-type domain protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.708
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.651
KXG89330.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 3.2e-94 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.587
KXG88583.1
KEGG: ols:Olsu_1705 0. 4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
     
 0.548
KXG89615.1
Repeat protein; KEGG: ckn:Calkro_0850 4.4e-09 cellulase., cellulose 1,4-beta-cellobiosidase; Psort location: Cellwall, score: 9.21.
    
 0.502
KXG89312.1
GA module; KEGG: dme:Dmel_CG18255 2.2e-23 Strn-Mlck; Stretchin-Mlck K00907; Psort location: Cellwall, score: 9.39.
    
 0.502
KXG89444.1
Repeat protein; KEGG: bme:BMEII0148 5.2e-05 serine protease.
    
 0.502
KXG88383.1
Repeat protein; KEGG: btl:BALH_2309 5.1e-09 bacillolysin K01400; Psort location: Cellwall, score: 9.98.
    
 0.502
KXG88384.1
Repeat protein; KEGG: bad:BAD_0708 4.5e-05 pulA; pullulanase; K01200 pullulanase; Psort location: Extracellular, score: 8.91.
    
 0.502
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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