STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89736.1Putative L-ribulose-5-phosphate 4-epimerase; KEGG: hor:Hore_18470 4.2e-43 L-fuculose phosphate aldolase K01628; Psort location: Cytoplasmic, score: 7.50. (220 aa)    
Predicted Functional Partners:
KXG88465.1
Putative hexulose-6-phosphate isomerase; KEGG: lca:LSEI_2733 1.3e-96 putative L-xylulose 5-phosphate 3-epimerase; K03082 hexulose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 7.50.
   
 0.930
KXG90829.1
KEGG: ols:Olsu_0921 6.4e-63 ribulose-5-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 7.50; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.792
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.706
KXG89737.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.689
KXG89735.1
KEGG: lru:HMPREF0538_20846 3.9e-95 PTS system galactitol-specific transporter subunit IIC K02775; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.681
KXG89550.1
KEGG: ols:Olsu_0112 8.9e-121 ketose-bisphosphate aldolase class-II; K01624 fructose-bisphosphate aldolase, class II; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.675
KXG90870.1
Putative 2,5-diketo-D-gluconic acid reductase A; KEGG: bcy:Bcer98_2796 5.3e-52 2,5-didehydrogluconate reductase; Psort location: Cytoplasmic, score: 9.97.
     
 0.663
KXG89734.1
Hypothetical protein; KEGG: str:Sterm_3553 2.4e-17 PTS system lactose/cellobiose-specific transporter subunit IIB; K02774 PTS system, galactitol-specific IIB component.
  
  
 0.632
KXG89555.1
Triose-phosphate isomerase family protein; KEGG: ols:Olsu_0106 8.1e-95 triosephosphate isomerase K01803; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.590
KXG90534.1
KEGG: ols:Olsu_0802 0. iron-containing alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.554
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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