STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89615.1Repeat protein; KEGG: ckn:Calkro_0850 4.4e-09 cellulase., cellulose 1,4-beta-cellobiosidase; Psort location: Cellwall, score: 9.21. (507 aa)    
Predicted Functional Partners:
KXG89171.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: lif:LINJ_16_1550 8.1e-30 putative kinesin; Psort location: Cellwall, score: 9.99.
  
 
 0.875
KXG91335.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.1e-106 h16_A1582; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.728
KXG88872.1
Hypothetical protein; KEGG: ols:Olsu_1441 9.3e-94 glucan 1,3-beta-glucosidase; K01210 glucan 1,3-beta-glucosidase; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.721
KXG88425.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: cfa:491027 8.7e-11 CDK12, CRKRS; cyclin-dependent kinase 12; K08819 cyclin-dependent kinase 12/13; Psort location: Cellwall, score: 10.00.
  
 0.714
acpP
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.637
KXG90299.1
Hypothetical protein; KEGG: ooe:OEOE_0287 7.5e-05 D-alanyl transfer protein; K14188 D-alanine--poly(phosphoribitol) ligase subunit 2; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.637
KXG91288.1
Cna protein B-type domain protein; Psort location: Cellwall, score: 9.20.
 
  
 0.629
KXG89840.1
Cna protein B-type domain protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.626
KXG88506.1
Sporulation initiation inhibitor protein Soj; KEGG: nmh:NMBH4476_0189 5.0e-63 chromosome partitioning protein, ParA family K03496; Psort location: CytoplasmicMembrane, score: 9.96.
   
 
 0.607
KXG91083.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
   
  0.599
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.