STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89530.1Carbamate kinase; KEGG: eyy:EGYY_18950 2.6e-98 hypothetical protein; K00926 carbamate kinase; Psort location: Cytoplasmic, score: 7.50. (320 aa)    
Predicted Functional Partners:
KXG90818.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.975
pyrB
KEGG: ols:Olsu_0992 2.1e-144 aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.925
KXG90314.1
KEGG: apv:Apar_0610 3.4e-183 glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.923
KXG89567.1
Glutamine synthetase, beta-grasp domain protein; KEGG: ols:Olsu_1347 8.4e-180 L-glutamine synthetase K01915; Psort location: Cytoplasmic, score: 9.67.
     
 0.906
KXG90817.1
C4-dicarboxylate anaerobic carrier; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.841
arcA
Arginine deiminase; KEGG: ols:Olsu_0836 7.9e-200 arginine deiminase K01478; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.815
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.580
KXG89529.1
Hypothetical protein; KEGG: sgg:SGGBAA2069_c09080 1.7e-30 tanA1; tannase.
       0.488
KXG89181.1
L-asparaginase, type I; KEGG: cgo:Corgl_0285 1.6e-105 asparaginase K01424; Psort location: Cytoplasmic, score: 9.97.
     
 0.483
KXG90499.1
KEGG: apv:Apar_0646 3.1e-118 phosphate acetyltransferase; K00625 phosphate acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.478
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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