STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89542.1Sugar isomerase, AgaS family; KEGG: apv:Apar_1062 1.1e-117 sugar isomerase (SIS); K02082 tagatose-6-phosphate ketose/aldose isomerase; Psort location: Cytoplasmic, score: 7.50. (400 aa)    
Predicted Functional Partners:
KXG89545.1
KEGG: vvm:VVMO6_04414 3.2e-45 PTS system N-acetylgalactosamine-specific IIC component K02746; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.881
KXG89541.1
KEGG: ols:Olsu_0539 1.9e-127 N-acetylglucosamine 6-phosphate deacetylase K01443; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.876
KXG89543.1
UbiC transcription regulator-associated domain protein; KEGG: xne:XNC1_0089 9.3e-23 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.869
KXG89544.1
KEGG: etd:ETAF_0623 5.1e-63 PTS system N-acetylgalactosamine-specific transporter subunit IID K02747; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.837
KXG89546.1
KEGG: apv:Apar_1066 2.8e-62 PTS system mannose/fructose/sorbose family transporter subunit IIB K02745; Psort location: Cytoplasmic, score: 9.67.
 
    0.705
KXG90255.1
Putative PTS system mannose-specific EIIAB component; KEGG: apv:Apar_0464 8.0e-104 Protein-N(pi)-phosphohistidine--sugar phosphotransferase; K02793 PTS system, mannose-specific IIA component K02794; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.662
KXG90627.1
KEGG: sor:SOR_1533 3.3e-240 PTS system, IIABC component; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.593
KXG89446.1
Phosphotransferase system, EIIC; KEGG: pta:HPL003_08735 5.9e-92 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.593
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.589
KXG89548.1
KEGG: apv:Apar_1068 2.3e-26 PTS system fructose subfamily transporter subunit IIA; K02744 PTS system, N-acetylgalactosamine-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.513
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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