STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89579.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (1080 aa)    
Predicted Functional Partners:
KXG89578.1
UvrD/REP helicase; KEGG: kol:Kole_1028 4.6e-45 Exodeoxyribonuclease V; Psort location: Cytoplasmic, score: 9.97; Belongs to the helicase family. UvrD subfamily.
 
 
 0.997
KXG90326.1
Hypothetical protein; KEGG: cgo:Corgl_0997 1.3e-25 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.777
KXG90315.1
Acetyltransferase, GNAT family; KEGG: rho:RHOM_09780 1.3e-11 tRNA (guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
KXG90773.1
Tetratricopeptide repeat protein; KEGG: sur:STAUR_2179 4.4e-09 Ser/Thr kinase family protein.
  
     0.772
KXG91336.1
Hypothetical protein; KEGG: cjk:jk0707 0.0084 aceF; dihydrolipoamide acetyltransferase K00658; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.771
KXG88458.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.757
KXG90284.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
  
     0.754
KXG91257.1
Hypothetical protein; KEGG: zpr:ZPR_2858 0.0027 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.750
KXG88815.1
Hypothetical protein; KEGG: nde:NIDE2025 1.7e-09 putative serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50.
  
     0.748
KXG90528.1
Hypothetical protein; KEGG: bac:BamMC406_3694 3.8e-05 exopolysaccharide tyrosine-protein kinase; Psort location: Cytoplasmic, score: 7.50.
  
     0.747
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.