STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89339.1Tat pathway signal sequence domain protein; KEGG: bao:BAMF_3327 6.9e-10 cwlO; cell wall DL-endopeptidase. (378 aa)    
Predicted Functional Partners:
KXG89373.1
Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.935
KXG88491.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: apv:Apar_1348 1.2e-116 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
  0.812
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.629
tsaD
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.549
KXG88457.1
HAD hydrolase, family IIB; KEGG: apo:Arcpr_0814 4.3e-05 SPP-like hydrolase K07024.
  
     0.548
KXG90773.1
Tetratricopeptide repeat protein; KEGG: sur:STAUR_2179 4.4e-09 Ser/Thr kinase family protein.
  
 
 0.532
KXG89340.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.466
KXG91012.1
4Fe-4S binding domain protein; KEGG: mru:mru_0830 3.5e-09 ferredoxin; K00205 formylmethanofuran dehydrogenase subunit F; Psort location: Cytoplasmic, score: 7.50.
  
     0.445
KXG91336.1
Hypothetical protein; KEGG: cjk:jk0707 0.0084 aceF; dihydrolipoamide acetyltransferase K00658; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.433
KXG90800.1
STAS domain protein; KEGG: cni:Calni_0067 9.3e-10 anti-sigma regulatory factor, serine/threonine protein kinase; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50; Belongs to the anti-sigma-factor antagonist family.
 
     0.403
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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