STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89346.1Tat pathway signal sequence domain protein; KEGG: hiq:CGSHiGG_03235 7.6e-44 fbpC; ferric transporter ATP-binding subunit K02012. (382 aa)    
Predicted Functional Partners:
KXG89345.1
ABC transporter, permease protein; KEGG: cnc:CNE_2c19150 6.4e-47 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02011; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.990
KXG89344.1
ABC transporter, ATP-binding protein; KEGG: ols:Olsu_1166 1.0e-160 ABC transporter; K02010 iron(III) transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.972
KXG89347.1
Hypothetical protein.
       0.541
KXG90637.1
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_0509 2.0e-105 glycerol-3-phosphate-transporting ATPase K10112; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
  
 
 0.533
KXG89343.1
Nitroreductase family protein; KEGG: fnu:FN1254 5.7e-23 dihydropteridine reductase K00540; Psort location: Cytoplasmic, score: 7.50.
  
    0.452
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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