STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89351.1SapB family protein; KEGG: hip:CGSHiEE_08975 3.5e-23 coaD; phosphopantetheine adenylyltransferase K07507; Psort location: CytoplasmicMembrane, score: 10.00. (232 aa)    
Predicted Functional Partners:
KXG89350.1
Hypothetical protein.
       0.648
KXG90769.1
e1-E2 ATPase; KEGG: cgo:Corgl_0850 1.1e-175 P-type HAD superfamily ATPase; K01552; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.637
KXG90532.1
Putative potassium/sodium efflux P-type ATPase, fungal-type; KEGG: apv:Apar_1038 0. P-type HAD superfamily ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.637
KXG89403.1
Magnesium-importing ATPase; KEGG: cdf:CD3373 0. mgtB; magnesium transporting ATPase, P-type K01531; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.637
KXG89352.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.532
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.528
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.482
ftsH-2
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.482
KXG91364.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 6.7e-84 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.448
KXG89187.1
SPFH/Band 7/PHB domain protein; KEGG: amt:Amet_3104 2.6e-05 HflK protein; K04088 membrane protease subunit HflK; Psort location: CytoplasmicMembrane, score: 8.16.
    
   0.444
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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