STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89369.1Transcriptional regulator, GntR family; KEGG: reh:H16_A3019 6.0e-08 hutC; histidine utilization repressor K05836; Psort location: Cytoplasmic, score: 7.50. (249 aa)    
Predicted Functional Partners:
KXG90987.1
KEGG: ols:Olsu_0499 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
    
  0.888
KXG90548.1
KEGG: efe:EFER_3657 9.2e-16 GntR-family transcriptional regulator K03710; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
KXG89556.1
UbiC transcription regulator-associated domain protein; KEGG: reh:H16_A3019 1.7e-16 hutC; histidine utilization repressor K05836; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
KXG91413.1
UbiC transcription regulator-associated domain protein; KEGG: xne:XNC1_0089 1.8e-19 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
     0.773
KXG89535.1
UbiC transcription regulator-associated domain protein; KEGG: reh:H16_A3019 8.2e-15 hutC; histidine utilization repressor K05836; Psort location: Cytoplasmic, score: 7.50.
  
     0.773
KXG89543.1
UbiC transcription regulator-associated domain protein; KEGG: xne:XNC1_0089 9.3e-23 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
     0.773
KXG90627.1
KEGG: sor:SOR_1533 3.3e-240 PTS system, IIABC component; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.513
KXG89446.1
Phosphotransferase system, EIIC; KEGG: pta:HPL003_08735 5.9e-92 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.513
KXG89805.1
DNA-binding helix-turn-helix protein; KEGG: apb:SAR116_1068 0.0011 transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.493
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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