Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXG89384.1Iron dependent repressor, DNA binding domain protein; Psort location: Cytoplasmic, score: 7.50. (150 aa)    
Predicted Functional Partners:
KXG88497.1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
   
   0.744
KXG91016.1
Cell envelope-like function transcriptional attenuator common domain protein; KEGG: blw:W7Y_0658 0.0045 Multimodular transpeptidase-transglycosylase; Psort location: CytoplasmicMembrane, score: 9.51.
   
    0.545
KXG89353.1
Transcriptional regulator, Fur family; KEGG: mct:MCR_0333 1.0e-09 fur; ferric uptake regulation protein Fur K03711; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family.
  
  
 0.523
KXG89383.1
KEGG: ols:Olsu_0142 5.9e-108 nucleotidyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
    0.497
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.495
KXG89138.1
KEGG: ols:Olsu_0879 2.7e-48 signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 8.78; Belongs to the peptidase S26 family.
   
    0.458
KXG88575.1
Metal ion transporter, metal ion transporter family; KEGG: hiq:CGSHiGG_02375 5.7e-12 argininosuccinate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.443
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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