Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXG89396.1 | atpA | HMPREF3232_00963 | HMPREF3232_00956 | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.450 |
| KXG89396.1 | atpC | HMPREF3232_00963 | HMPREF3232_00953 | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.437 |
| KXG89396.1 | atpD | HMPREF3232_00963 | HMPREF3232_00954 | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.464 |
| KXG89396.1 | atpE | HMPREF3232_00963 | HMPREF3232_00959 | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.453 |
| KXG89396.1 | prfA | HMPREF3232_00963 | HMPREF3232_00965 | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.634 |
| KXG89396.1 | prmC | HMPREF3232_00963 | HMPREF3232_00964 | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | protein-(glutamine-N5) methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the SUA5 family. | 0.727 |
| KXG89396.1 | rpmE | HMPREF3232_00963 | HMPREF3232_00967 | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | Ribosomal protein L31; Binds the 23S rRNA. | 0.412 |
| KXG91266.1 | prmC | HMPREF3232_00164 | HMPREF3232_00964 | KEGG: pfe:PSF113_4057 2.0e-13 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50. | protein-(glutamine-N5) methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the SUA5 family. | 0.623 |
| atpA | KXG89396.1 | HMPREF3232_00956 | HMPREF3232_00963 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | 0.450 |
| atpA | atpC | HMPREF3232_00956 | HMPREF3232_00953 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| atpA | atpD | HMPREF3232_00956 | HMPREF3232_00954 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpE | HMPREF3232_00956 | HMPREF3232_00959 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | atpG | HMPREF3232_00956 | HMPREF3232_00955 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | atpH | HMPREF3232_00956 | HMPREF3232_00957 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | prfA | HMPREF3232_00956 | HMPREF3232_00965 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.460 |
| atpA | prmC | HMPREF3232_00956 | HMPREF3232_00964 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | protein-(glutamine-N5) methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the SUA5 family. | 0.796 |
| atpC | KXG89396.1 | HMPREF3232_00953 | HMPREF3232_00963 | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50. | 0.437 |
| atpC | atpA | HMPREF3232_00953 | HMPREF3232_00956 | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpC | atpD | HMPREF3232_00953 | HMPREF3232_00954 | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpC | atpE | HMPREF3232_00953 | HMPREF3232_00959 | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
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