STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89445.1Sugar-binding domain protein; KEGG: vfi:VF_A0400 2.1e-32 lsrR; transcriptional repressor; Psort location: CytoplasmicMembrane, score: 9.55. (317 aa)    
Predicted Functional Partners:
KXG89446.1
Phosphotransferase system, EIIC; KEGG: pta:HPL003_08735 5.9e-92 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.571
KXG89317.1
Putative dihydroxyacetone kinase DhaK1b subunit; KEGG: sds:SDEG_0554 2.6e-89 DhaKLM operon coactivator DhaQ K00863; Psort location: Cytoplasmic, score: 7.50.
   
  0.494
KXG89320.1
KEGG: ssa:SSA_0049 1.4e-131 dihydroxyacetone kinase subunit DhaK K05878; Psort location: Cytoplasmic, score: 7.50.
   
  0.482
KXG89447.1
PHP domain protein; KEGG: nmm:NMBM01240149_0362 8.4e-22 PHP domain-containing protein K07053; Psort location: Cytoplasmic, score: 7.50.
       0.421
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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