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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89463.1ABC transporter, ATP-binding protein; KEGG: cle:Clole_3439 1.6e-130 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (600 aa)    
Predicted Functional Partners:
KXG90508.1
KEGG: gfo:GFO_0536 3.5e-62 ABC-type transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
     
0.897
KXG90537.1
Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: sap:Sulac_2661 2.5e-93 oligopeptide/dipeptide ABC transporter ATPase K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
 
0.891
KXG88485.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_1569 2.2e-76 sulfate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 8.78.
     
0.869
KXG89462.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3438 1.4e-156 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.845
KXG91120.1
ABC transporter, ATP-binding protein; KEGG: gth:Geoth_2007 6.6e-45 Heme-transporting ATPase K09687; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.694
KXG88386.1
ABC transporter, ATP-binding protein; KEGG: dku:Desku_2823 6.5e-54 sulfate-transporting ATPase; Psort location: CytoplasmicMembrane, score: 8.78.
  
0.648
KXG88596.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bya:BANAU_3847 2.0e-61 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78.
   
0.629
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.562
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.562
acpP
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.550
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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