STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89171.1LPXTG-motif protein cell wall anchor domain protein; KEGG: lif:LINJ_16_1550 8.1e-30 putative kinesin; Psort location: Cellwall, score: 9.99. (608 aa)    
Predicted Functional Partners:
KXG89330.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 3.2e-94 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.909
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
    
 0.898
KXG89615.1
Repeat protein; KEGG: ckn:Calkro_0850 4.4e-09 cellulase., cellulose 1,4-beta-cellobiosidase; Psort location: Cellwall, score: 9.21.
  
 
 0.875
KXG89312.1
GA module; KEGG: dme:Dmel_CG18255 2.2e-23 Strn-Mlck; Stretchin-Mlck K00907; Psort location: Cellwall, score: 9.39.
  
 
 0.875
KXG89444.1
Repeat protein; KEGG: bme:BMEII0148 5.2e-05 serine protease.
  
 
 0.875
KXG88383.1
Repeat protein; KEGG: btl:BALH_2309 5.1e-09 bacillolysin K01400; Psort location: Cellwall, score: 9.98.
  
 
 0.875
KXG88384.1
Repeat protein; KEGG: bad:BAD_0708 4.5e-05 pulA; pullulanase; K01200 pullulanase; Psort location: Extracellular, score: 8.91.
  
 
 0.875
KXG88461.1
FG-GAP repeat protein; KEGG: npu:Npun_F1457 2.1e-21 outer membrane adhesin-like protein; Psort location: CytoplasmicMembrane, score: 9.36.
  
 
 0.875
smc
Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 0.851
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.846
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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