STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG89188.1Cof-like hydrolase; KEGG: ctu:CTU_14460 6.9e-50 ybjI; phosphatase ybjI K07024; Psort location: Cytoplasmic, score: 7.50. (266 aa)    
Predicted Functional Partners:
KXG88907.1
KEGG: bde:BDP_1386 6.2e-33 hydrolase K07024; Psort location: Cytoplasmic, score: 7.50.
  
     0.772
KXG90255.1
Putative PTS system mannose-specific EIIAB component; KEGG: apv:Apar_0464 8.0e-104 Protein-N(pi)-phosphohistidine--sugar phosphotransferase; K02793 PTS system, mannose-specific IIA component K02794; Psort location: Cytoplasmic, score: 9.97.
    
 0.586
KXG88858.1
KEGG: pdn:HMPREF9137_0030 1.9e-166 class I/II aminotransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.456
KXG89189.1
Putative alkyl hydroperoxide reductase F subunit; KEGG: apv:Apar_0907 1.2e-164 thioredoxin-disulfide reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
    0.455
KXG90585.1
Riboflavin kinase; KEGG: ols:Olsu_0999 9.1e-48 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
   
 0.454
KXG89187.1
SPFH/Band 7/PHB domain protein; KEGG: amt:Amet_3104 2.6e-05 HflK protein; K04088 membrane protease subunit HflK; Psort location: CytoplasmicMembrane, score: 8.16.
       0.453
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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