STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whiAHypothetical protein; Involved in cell division and chromosome segregation. (252 aa)    
Predicted Functional Partners:
KXG89146.1
Hypothetical protein; Displays ATPase and GTPase activities.
 
  
 0.804
KXG90811.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
   
 0.639
KXG89130.1
Hydrolase, HD family; KEGG: cle:Clole_2112 1.3e-15 metal dependent phosphohydrolase K00969; Psort location: Cytoplasmic, score: 7.50.
  
     0.621
xerC
Phage integrase, SAM-like domain protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.613
KXG90814.1
KEGG: bpb:bpr_I2050 3.2e-155 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134; Psort location: Cytoplasmic, score: 9.67.
     
 0.593
KXG90291.1
DivIVA domain protein; KEGG: nmg:Nmag_1377 3.1e-07 ATP synthase H subunit; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 9.67.
  
   
 0.572
KXG88359.1
Cobalt transport protein; KEGG: bya:BANAU_0146 8.6e-13 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.532
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
     
 0.531
pgk
KEGG: ols:Olsu_1269 2.4e-175 phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.521
KXG89148.1
Hypothetical protein; KEGG: mmw:Mmwyl1_1672 8.8e-06 beta strand repeat-containing protein; Psort location: Cellwall, score: 9.39.
       0.515
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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