STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88819.1HAD hydrolase, family IA, variant 3; KEGG: ols:Olsu_0718 1.2e-47 haloacid dehalogenase domain-containing protein hydrolase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 7.50. (255 aa)    
Predicted Functional Partners:
KXG90510.1
Putative phosphoglycolate phosphatase, bacterial; KEGG: ols:Olsu_1374 1.5e-40 HAD-superfamily hydrolase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 7.50.
  
  
 
0.932
KXG90627.1
KEGG: sor:SOR_1533 3.3e-240 PTS system, IIABC component; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.911
KXG89446.1
Phosphotransferase system, EIIC; KEGG: pta:HPL003_08735 5.9e-92 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.911
KXG88533.1
Hydrolase, NUDIX family; KEGG: ols:Olsu_0031 3.5e-55 NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 7.50.
      0.902
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.869
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
  0.863
KXG90764.1
Prephenate dehydratase; KEGG: ols:Olsu_0846 1.5e-111 Chorismate mutase K14170; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.823
KXG90593.1
Inosine 5-monophosphate dehydrogenase; KEGG: ols:Olsu_1037 1.1e-239 IMP dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
  
 
  0.803
KXG89440.1
Putative N-acetylmuramic acid phosphotransfer permease; KEGG: gte:GTCCBUS3UF5_22650 6.7e-84 phosphotransferase system EIIC; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.779
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
 
  0.699
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.