STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88858.1KEGG: pdn:HMPREF9137_0030 1.9e-166 class I/II aminotransferase; Psort location: Cytoplasmic, score: 7.50. (601 aa)    
Predicted Functional Partners:
KXG90764.1
Prephenate dehydratase; KEGG: ols:Olsu_0846 1.5e-111 Chorismate mutase K14170; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.971
KXG88583.1
KEGG: ols:Olsu_1705 0. 4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
    
 0.951
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
 
 0.948
KXG90768.1
Prephenate dehydrogenase; KEGG: ova:OBV_37820 7.7e-51 putative dehydrogenase; K04517 prephenate dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.936
KXG88857.1
Hypothetical protein.
 
     0.917
pgi
KEGG: ols:Olsu_1733 9.8e-241 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.
  
 0.898
KXG89411.1
Aminotransferase, class I/II; KEGG: ols:Olsu_0095 2.7e-126 class I and II aminotransferase; K11358 aspartate aminotransferase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.892
KXG90855.1
Aminotransferase, class I/II; KEGG: gva:HMPREF0424_1311 1.4e-200 aminotransferase AlaT K14260; Psort location: Cytoplasmic, score: 7.50.
  
 
0.874
pgk
KEGG: ols:Olsu_1269 2.4e-175 phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.869
KXG91253.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.838
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.