STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG88867.1Transcriptional regulator, DeoR family; KEGG: pfe:PSF113_5905 9.9e-19 glmR; protein GlmR. (250 aa)    
Predicted Functional Partners:
KXG88450.1
Transcriptional regulator, DeoR family; KEGG: lcb:LCABL_29260 1.1e-09 nadD; Nicotinic acid mononucleotide adenyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
KXG90306.1
Phosphotransferase system, EIIC; KEGG: efa:EF0694 2.0e-130 PTS system fructose-specific transporter subunit IIBC; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.595
KXG90307.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: ols:Olsu_0535 2.6e-50 PTS system D-fructose-specific IIA component (F1P-forming), Frc family; K02768 PTS system, fructose-specific IIA component; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.595
KXG88868.1
Hydrolase, TatD family; KEGG: ols:Olsu_1436 2.4e-71 TatD-related deoxyribonuclease; K03424 TatD DNase family protein; Psort location: Cytoplasmic, score: 9.67.
  
    0.492
KXG90253.1
KEGG: smc:SmuNN2025_1479 0. pfl2; formate acetyltransferase; K00656 formate C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.483
rsmA
Putative dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.479
KXG89396.1
KEGG: ols:Olsu_0122 4.3e-57 ribose-5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.465
KXG88544.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: apv:Apar_1286 1.8e-33 putative PTS IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.407
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.